Browse of TCMCG022C06119 protein

CDS

Accession Number	TCMCG022C06119
gbkey	CDS
Protein Id	XP_010035005.2
Location	join(569337..569653,571324..571470,572500..572653,573198..573333,573803..573948,574654..574749,574911..574963,575439..575570,576069..576120,576204..576323,576553..576687,577062..577190,577402..577479,578421..578555,579299..579393,580379..580569,581681..582468,583227..583307,583400..583457,583460..583473,583542..583619,584152..584382,584573..584704,584925..585101,585348..585533,586371..586756,587096..587210)
Gene	LOC104424329
GeneID	104424329
Organism	Eucalyptus grandis

Protein

Length	1454aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA698663
db_source	XM_010036703.3
Definition	LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 1 [Eucalyptus grandis]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Cleavage and polyadenylation specificity factor
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03019        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K14401        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03015        [VIEW IN KEGG] map03015        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0003729        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006378        [VIEW IN EMBL-EBI] GO:0006379        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006397        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016071        [VIEW IN EMBL-EBI] GO:0031123        [VIEW IN EMBL-EBI] GO:0031124        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043631        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0090305        [VIEW IN EMBL-EBI] GO:0090501        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGAGCTACGCGGCCTACAAGATGATGCACTGGCCCACGGGCATCGACAACTGCGGGTCGGGGTTCATCACTCACAGCCCTTCCGACTTCCCTCCCCGGATTCCGCCGTCGCAGACCGACGATCTCGAGCCGGACTACGCGCCGCCGCGGCGAGAGATCGGACCCGTCCCGAATCTCGTTGTCACCGCCGCGAATGTTCTTGAAGTGTACGTAGTGAGAGTGCAAGAGGACGGCGATAAGGATTCCGGCGAGGCCAAGCGAGGTGGAGCAATGGACGGTGTTTCCGGCGCTTCGCTCGAGCTCGTTTGCCATTACAGGTTGCATGGTAATGTTGAAAGTATGGCAGTACTGTCAACTGGAGGTGGTAATGGTTCCAGGAGCAGAGATTCTATCATTTTAACATTTCAAGATGCAAAAATTTCCATTTTGGAGTTTGATGATTCGATTCATGGACTTCGCACAACATCTATGCATTGTTTTGAGGGTCCAGATTGGCTTCATCTCAAAAGAGGGAGAGAATCTTTTGCCAGAGGCCCACTGGTGAAGGTTGATCCTCAAGGCAGGTGCGGAGGGGTTCTTGTTTATGGTCTGCAAATGATAATGCTTAAGGCTTCTCAGGTTGGTTCTGGCTTGGTGGGAGATGAGGACACATTTGAATCGGCAGGTGCAGTTTCCATTCGAGTAGAATCATCCTACATAATCAGTCTCCGGGAGTTGGAAATGAAGCATGTAAAAGATTTTGTATTTGTACACGGCTATATTGAGCCTGTGATGGTAATACTTCATGAGCGGGAGCTTACATGGGCGGGACGTGTTTCCTGGAAGAACCATACTTGCATGATATCTGCACTCAGCATTAGCACAACCCTGAAGCAGCATCCTCTGATTTGGTCAGCCTCAAATCTCCCTCATGATGCCTACAAGCTTCTTGCAGTACCTTCTCCAATCGGTGGGGTTCTTGTGATTTCTGCTAATGCTATTCATTATCACAGTCAGTCTGCTTCCTGTGTTTTGGCTCTGAATAGTTATGCCAGTTCTGCTGATGGCAGTCAAGAGATGCCAAAGTCGAGTTTCAGTGTTGAGCTTGATGCTGCCAGTGCCACTTGGTTACTGAATGATGTGGTCTTGCTGTCGACCAAAACCGGGGAGTTGTTGCTGCTCACCCTTGTTTATGACGGGCGTGTGGTGCAGCGATTGGATCTTGCAAAGTCAAAGGCTTCTGTGCTTACTTCTGGGATTACAACAATTGGAAATTCCTTATTTTTCCTGGGCAGTCGGTTGGGAGACAGTTTGTTGGTGCAATATACTTGTGGGTTTGGAACCTCAAAGCCTTCATCTGGTTTGAAGGAAGAGGTGGGAGACATTGAAGGTGATGCCCCTCTGGCGAAGAGGTTGCGCAGGTCCTCTTCTGATGCTTTGCAAGACATGGTTGGTGGAGAGGAGCTCTCTATACATGGTTTGACGCCAAGTAATGCAGAATCTGCACAGAAAACCTTTTCATTTGCAGTGAGGGACTCTTTGATTAACATCGGCCCTCTGAAAGATTTTGCATATGGTTTGCGGATCAATGCTGATGCTAATGCAACTGGAGTTGCAAAACAAAGCAACTATGAACTGGTGTGTTGTTCTGGTCATGGGAAGAACGGTTCTCTGTGTGTTCTGAGGCAGTCAGTTCGTCCAGAAATAATTACTGAGGTTGAACTACCAGGTTGCAAAGGCATTTGGACCGTCTACCACAAGAACACCCGTGGTTTAGATTCTTCCAAAGTTGGGGTTGATGACGACGAATATCATGCATATTTAATTATTAGTCTGGAAAGTCGTACCATGGTGCTTGAAACGGCTGATCTTCTCAATGAAGTCACTGAAAGTGTTGATTATTATGTGCAAGGACGAACTATTGCTGCTGGGAATCTATTTGGAAGGCGACGAGTTATTCAGGTTTGTGAACGTGGAGCACGTGTCCTCAATGGTTCTTCTATGACACAAGATTTAAACTTAGTGGCCTCTAACTCTGAATTAGCGTCTGAGAGTTGCATGGTCTTAACTGTATCGATTGCTGATCCATATGTCTTACTAAAGATGACTGATGGAAGCATTCGGCTTCTTGTTGGAGATCCATCTACATGTACTGTTTCTGTTGTGACTCCAGCGACATTTGATGGCTCAAAAAAGTTTGTGTCTGCCTGTACACTCTATCATGATAAAGGTCCAGAACCTTGGCTTAGGAAGACCAATCCTGATGCATGGCTAACTACAGGTATAGATGAGGCCATTGACGGGGCTGATGGTGCAACTCAGGACCAGGGGGATATATATTGTGTGGTTTGCTACGAAAGTGGTGCCCTCGAAATGTTTGATGTTCCCAATTTCAGTTGTGTTTTCTCTGTGGATAAATTTGTGTCTGGAAAGATGCATCTCGTTGATACCTTCATGCAAGAAGAACTTGGTGATTTTCAGAAAGGAAATTTGGTAGGTTCTAATGAATCAGCCGGCCCAGGGAAGAAAGAAAATGCACAGAGTACAAAGGTTCTAGAGTTGGCCATGTATAGATGGTCTGGACAGCATAGCCGCCCTTTCCTTTTCGCAATATTGAATGATGGGACAATTCTTTGTTATCATGCCTATTTGTTTGAAGGTTCAGAAAGTGGTATAAAAAATGAAGCCACGGTTGCTAATAACAATTTTAGCAGCAAAGGCATTAATAGTGGTTCCAGGCTTAGAAATCTTCGATTCTTACGCGTTGCCTTGGACACATATACAAGAGAAGAGATGACCATAGGAAGCTCGTGCAATAGAGTTACATTCTTCAAGAATATTGGAGGATATCAAGGATTGTTTCTTTCTGGTTCAAGACCTTCTTGGTTTATGGTTATCAGAGAGAGGCTTCGGATTCATCCGCAGTTATGTGATGGATCAATTGTCGCCTTCACTGTTTTCCATAATGTAAACTGTAATCGTGGGCTCATATATGTGACCTCACAGGGTGTTCTAAAAATTTGCCAACTGCCATCTAATTGACAACTATTGACAGTACAAAACTTCCCAGTACAAAAGATTCCACTGAAAGGAACTCCACATCAAGTTACTTACTTTGCCGAGAAGAATCTGTACCCACTTATAGTTTCAACTCTGGTTCATCGGCCATTGAATCAAGTTGTTTCATCTCTTGTTGATCAAGAAGTTAGCCATCAGATTGAAAATCACAGTCTAAATCCTGATGACATACACCGAACTTATGCAGTTGATGAGTTTGAGGTTCGGATCTTGGAACCAGAAAAGTCTGGAGGACCTTGGCTGACCAAGGCTACAATTCCCATGCAAAATTCTGAGAATGCATTAACCGTGCGTGTTGTAACACTGCTTAATATGACGACAAAGGAAAATGAGACACTTTTAGCTATTGGAACTGCTTATGTTCAAGGTGAGGATGTTGCTGCAAGAGGGCGCATACTTTTGTTTTCTATGGGGAAAGACACTGACAATCCTCAAACTCTGGTTTCAGAGGTTTACTCGAAGGAATTGAAGGGTGCTATATCTGCTGTAGCCTCACTTCAAGGCTATCTACTGATAGCTTCTGGTCCCAAGATAATTTTACACAAATGGAATGGAACTGAATTGACTGGTGTAGCATTTTTTGATGCCCCGCCTCTACACGTTGTTAGCTTGAATGTTGTCAAGAATTTTATTCTACTTGGTGACATCCACAAGAGCATATACTTCCTCAGCTGGAAAGAACAAGGCTCTCAGCTTAACTTGTTGGCCAAAGATTTTGGTTCCTTGGATTGTTTCGCAACGGAGTTTCTAATTGATGGAAGTACATTGAGTCTGATTGTATCCGATGAGCAAAAAAATGTTCAGGTGTTCTATTATGCACCCAAGATGTCTGAGAGTTGGAAGGGACAGAAACTTCTCTCAAGGGCAGAATTTCATGTAGGTGCTCATGTGACAAAATTCATGCGGTTGCAGATGCTTCCTACTTCCTCCAGTCAAAGTGGTCCTACTCCTGTTTCGGACAAGACCAACCGGTTTGCTTTGTTATTTGGTACCCTAGATGGCAGCATTGGCTGCATTGCTCCTCTTGATGAGCTAACCTTCCGTAGACTCCAGTCACTACAGAGAAAGCTTGTTGACGCTGTTCCCCATGTTGCTGGCTTGAATCCAAGATCCTTCCGCCAGTTCCACTCTAATGGGAAAGCACATCGGCCAGGCCCTGACAGTATTGTTGACTGTGAACTGCTTTACCATTACGAGCTGCTCTCCTTGGATGAACAATTGGAGATAGCGCACCAGATAGGAACAACTCGCTCGCAGATTCTCTCAAATTTGAATGACCTTGTTGAGGGAACAAGTTTCCTATGA

Protein:   MSYAAYKMMHWPTGIDNCGSGFITHSPSDFPPRIPPSQTDDLEPDYAPPRREIGPVPNLVVTAANVLEVYVVRVQEDGDKDSGEAKRGGAMDGVSGASLELVCHYRLHGNVESMAVLSTGGGNGSRSRDSIILTFQDAKISILEFDDSIHGLRTTSMHCFEGPDWLHLKRGRESFARGPLVKVDPQGRCGGVLVYGLQMIMLKASQVGSGLVGDEDTFESAGAVSIRVESSYIISLRELEMKHVKDFVFVHGYIEPVMVILHERELTWAGRVSWKNHTCMISALSISTTLKQHPLIWSASNLPHDAYKLLAVPSPIGGVLVISANAIHYHSQSASCVLALNSYASSADGSQEMPKSSFSVELDAASATWLLNDVVLLSTKTGELLLLTLVYDGRVVQRLDLAKSKASVLTSGITTIGNSLFFLGSRLGDSLLVQYTCGFGTSKPSSGLKEEVGDIEGDAPLAKRLRRSSSDALQDMVGGEELSIHGLTPSNAESAQKTFSFAVRDSLINIGPLKDFAYGLRINADANATGVAKQSNYELVCCSGHGKNGSLCVLRQSVRPEIITEVELPGCKGIWTVYHKNTRGLDSSKVGVDDDEYHAYLIISLESRTMVLETADLLNEVTESVDYYVQGRTIAAGNLFGRRRVIQVCERGARVLNGSSMTQDLNLVASNSELASESCMVLTVSIADPYVLLKMTDGSIRLLVGDPSTCTVSVVTPATFDGSKKFVSACTLYHDKGPEPWLRKTNPDAWLTTGIDEAIDGADGATQDQGDIYCVVCYESGALEMFDVPNFSCVFSVDKFVSGKMHLVDTFMQEELGDFQKGNLVGSNESAGPGKKENAQSTKVLELAMYRWSGQHSRPFLFAILNDGTILCYHAYLFEGSESGIKNEATVANNNFSSKGINSGSRLRNLRFLRVALDTYTREEMTIGSSCNRVTFFKNIGGYQGLFLSGSRPSWFMVIRERLRIHPQLCDGSIVAFTVFHNVNCNRGLIYVTSQGVLKICQLPSNXQLLTVQNYXPVQKIPLKGTPHQVTYFAEKNLYPLIVSTLVHRPLNQVVSSLVDQEVSHQIENHSLNPDDIHRTYAVDEFEVRILEPEKSGGPWLTKATIPMQNSENALTVRVVTLLNMTTKENETLLAIGTAYVQGEDVAARGRILLFSMGKDTDNPQTLVSEVYSKELKGAISAVASLQGYLLIASGPKIILHKWNGTELTGVAFFDAPPLHVVSLNVVKNFILLGDIHKSIYFLSWKEQGSQLNLLAKDFGSLDCFATEFLIDGSTLSLIVSDEQKNVQVFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFMRLQMLPTSSSQSGPTPVSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQRKLVDAVPHVAGLNPRSFRQFHSNGKAHRPGPDSIVDCELLYHYELLSLDEQLEIAHQIGTTRSQILSNLNDLVEGTSFL